CDS

Accession Number TCMCG051C48980
gbkey CDS
Protein Id XP_024447618.1
Location complement(join(9893285..9893305,9893733..9893861,9894021..9894140,9894493..9894729,9894820..9895092,9895183..9895238,9895914..9897579))
Gene LOC18108392
GeneID 18108392
Organism Populus trichocarpa

Protein

Length 833aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024591850.1
Definition uncharacterized protein LOC18108392 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category S
Description RING-type zinc-finger
KEGG_TC 3.A.5.1,3.A.5.10,3.A.5.2,3.A.5.4
KEGG_Module M00335        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko02044        [VIEW IN KEGG]
KEGG_ko ko:K03070        [VIEW IN KEGG]
EC -
KEGG_Pathway ko02024        [VIEW IN KEGG]
ko03060        [VIEW IN KEGG]
ko03070        [VIEW IN KEGG]
map02024        [VIEW IN KEGG]
map03060        [VIEW IN KEGG]
map03070        [VIEW IN KEGG]
GOs GO:0000166        [VIEW IN EMBL-EBI]
GO:0000278        [VIEW IN EMBL-EBI]
GO:0000281        [VIEW IN EMBL-EBI]
GO:0000910        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004672        [VIEW IN EMBL-EBI]
GO:0004674        [VIEW IN EMBL-EBI]
GO:0004683        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005524        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005826        [VIEW IN EMBL-EBI]
GO:0005856        [VIEW IN EMBL-EBI]
GO:0005938        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006468        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007010        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0008092        [VIEW IN EMBL-EBI]
GO:0008144        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0015629        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016301        [VIEW IN EMBL-EBI]
GO:0016310        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016772        [VIEW IN EMBL-EBI]
GO:0016773        [VIEW IN EMBL-EBI]
GO:0016905        [VIEW IN EMBL-EBI]
GO:0017022        [VIEW IN EMBL-EBI]
GO:0017076        [VIEW IN EMBL-EBI]
GO:0018107        [VIEW IN EMBL-EBI]
GO:0018193        [VIEW IN EMBL-EBI]
GO:0018210        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0022411        [VIEW IN EMBL-EBI]
GO:0030029        [VIEW IN EMBL-EBI]
GO:0030036        [VIEW IN EMBL-EBI]
GO:0030554        [VIEW IN EMBL-EBI]
GO:0030863        [VIEW IN EMBL-EBI]
GO:0030864        [VIEW IN EMBL-EBI]
GO:0031033        [VIEW IN EMBL-EBI]
GO:0031035        [VIEW IN EMBL-EBI]
GO:0031037        [VIEW IN EMBL-EBI]
GO:0031038        [VIEW IN EMBL-EBI]
GO:0032153        [VIEW IN EMBL-EBI]
GO:0032155        [VIEW IN EMBL-EBI]
GO:0032553        [VIEW IN EMBL-EBI]
GO:0032555        [VIEW IN EMBL-EBI]
GO:0032559        [VIEW IN EMBL-EBI]
GO:0032984        [VIEW IN EMBL-EBI]
GO:0035639        [VIEW IN EMBL-EBI]
GO:0036094        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043168        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043624        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044430        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044448        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045159        [VIEW IN EMBL-EBI]
GO:0046777        [VIEW IN EMBL-EBI]
GO:0051301        [VIEW IN EMBL-EBI]
GO:0061640        [VIEW IN EMBL-EBI]
GO:0070938        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097367        [VIEW IN EMBL-EBI]
GO:0099568        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901265        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1903047        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAATCACCGGAATTACCAGAATGTCCGGTGTGTCTATCAACCTACGACGGCGAGTACACTATCCCAAGAGTACTCGCATGTGGGCATACAACCTGCGAGTCATGCCTTAAAAATATCCCACAGAAATACCCTCTAACCATTCGCTGTCCTGCATGTACACAACTTGTCAAGTACCCATCACAGCAAGGCCCTTCTTCACTTCCTAAAAACATTGATCTCCTTAGGCTGGTTCAGCAGCTACAAGATCATAATCCCCAGAAACCCAACAACAAATCCCAAATTGACAAACCAGTCCTTGCTCAAGACTTTGACTTCTTTGTGCCTCCTTCATGGTCTGATGAGTTTTATACTTCATGGAAGAACTGGGTTCTTGACAGAGATGATGTTTTTGTTGAGGATAAAGAGAGAGGATATGGGTTGTTAAAGGAGGGGAATAAAAAGGTGAAGGTGAGGCTTTTTAAGGTTGGCAATGATGGGGGTTTGTTGAGTGGTAAAGTTAAAGGATGTGTTTTTAAGTTGAGTTATGTTGCCAAGGTTATGAATTTGTTGAATGGGATGAAGGAGGAGAAGAGAGATGAATTGGGTTTTATTTTGAGGATTTGTGCTAAACAGGGAAGAATCTGTAAGGGTTGTGGTTTGTGGTGTGATTTGGAAGATGGGGTTTTGTATTTTGTGTGTGAGAGACTTAATGGGAATGTTTTGGATATGTTGGGTGATTTTGAGAATGGTTTGAGCAAAGATGGTTTGTCTAGTTTTGCAATGATTGGAATGGAAATGTATGAAGCAGTGATTGGATTGCATTTGGAAGGGCTAATTGTGGGAAGTTTAGGTGTTTCTTGCTTTGAATTGGATGGTTTTGGACATGTGAGTCTAAGTTTGAGTGAGGTTTTGGTGATGGGAAGGGCAGTTCATGATGGGGTTATGGAACTTGGTTCTGGTGGGAGAAGTTTAAGTGTTAAAAAATTGGGGAGATTGGTCGGTGAGATTTTGAAAAAGGAGGTTTTTGTGAGCCCAGAGGTTTTGTTTGGGATATTGAAGAGAGAGGGTATGGAGGTAGAATGTGGTAGCAATAGATATCCAATTGGCCTTGGCTCTGATGTTTGGACATTAGCTTGTACTGTCCTTAGAATGCTTATCGGGAAAGAATTCTTTGAGGAGCTAGGTGATCATGTAGATTCTATCATTTCAAAAAGAAGTGAAGACAATAATTTGGACTGTTCGGGTCTTTACACTGGTTTGATGGAGAAAGTCAGCTCTTTGTTGGAAAGTAAAACCGGTGAAGAATTGAAACCATTGCACCAGATGCTATGCAGGTCTTTGAGTTTTGATCCAGGGAATCGTCCACATGCTATTGATATGTGGAAGTGTATTAGGGACTTATTTATTAGACATCAGCATGATACTTCTGTTCCCAGATTGGGTGAGGCTATCCATGAGGAGAATAAGGAGCATGTGCGAGTTCTTGGAGAACTATGTTGGGTGCCCCTAAAAAAATCAACTCTTAAAAAATCCGAGTTAGCAGAAAAAAACAGTGGAGAAAATCAAGATCAAAGCGAGGACGTGAGAAATGATAAAGATATCGCTGAGGCTCTCGTGGAGGGGAAGGTCAAGTTCAAAGAAATGCAGGGCCATCTTGATTGTGTTACAGGATTTGCCATTGGAGGAGGATTTCTGTTTAGCTCCTCATTTGATAAAACAGTCCAGGTCTGGTCCTTGCAGGACTTCTCTCATATGCACACATTTAAGGGCCATGAGCATAAAGTCATGGCTGTAATTTATGTTGATGAAGAACTGCCATTATGCATTAGTGGGGATGGTGGAGGTGGCATATTTCTCTGGAGCATCAGTGTTCCTATGGGGAAAGAACCATTGAAGACATGGTATGAGCAAAAAGATTGGCGTTATAGTGGAATTCATGCCTTGACCACTGCAGGGAATGGGTATCTCTATACTGGTAGTGGAGATAGGTCAGTTAAGGCTTGGTCATTGCAGGATGGCACCCTGTCATGCATTATGGATGGTCATAAATCAGTAGTTTCCACGCTAGCAGCATGTGATGGGATTCTTTATAGTGGGAGTTGGGATGGAACCATCCGTCTGTGGAGTCTAACTGATCATAGTCCTTTGACAGTGTTGGGAAATGACTTGCCAGGAACTGCAACCTCTGTCTTGTCTGTCACTGCAAACCAGAATATTCTTGTTGCAGCCCATGAAAATGGACAGATAAAGGCATGGAGGGATGACGTGTTTAAGAAATCGACACAATGCCACAGTGGTGCGATTTTGGCTTGTGTCATGGAGGGAAAATGGCTATTCACCGGAGGTTGGGACAAAATTGTCAACGTACAGGAGTTGTCTGGAGATGAATTTCAGGTGGATACTAGACCCATTGGATCAATCCCAGGAGGTTCTGTGGTAACAGCTTTATTATGCTGGCAAGGAAAGCTTTTCGTTGGTCATGGAGATAGGACTATCAAGGTATACTACCATGGAAAGTGA
Protein:  
MESPELPECPVCLSTYDGEYTIPRVLACGHTTCESCLKNIPQKYPLTIRCPACTQLVKYPSQQGPSSLPKNIDLLRLVQQLQDHNPQKPNNKSQIDKPVLAQDFDFFVPPSWSDEFYTSWKNWVLDRDDVFVEDKERGYGLLKEGNKKVKVRLFKVGNDGGLLSGKVKGCVFKLSYVAKVMNLLNGMKEEKRDELGFILRICAKQGRICKGCGLWCDLEDGVLYFVCERLNGNVLDMLGDFENGLSKDGLSSFAMIGMEMYEAVIGLHLEGLIVGSLGVSCFELDGFGHVSLSLSEVLVMGRAVHDGVMELGSGGRSLSVKKLGRLVGEILKKEVFVSPEVLFGILKREGMEVECGSNRYPIGLGSDVWTLACTVLRMLIGKEFFEELGDHVDSIISKRSEDNNLDCSGLYTGLMEKVSSLLESKTGEELKPLHQMLCRSLSFDPGNRPHAIDMWKCIRDLFIRHQHDTSVPRLGEAIHEENKEHVRVLGELCWVPLKKSTLKKSELAEKNSGENQDQSEDVRNDKDIAEALVEGKVKFKEMQGHLDCVTGFAIGGGFLFSSSFDKTVQVWSLQDFSHMHTFKGHEHKVMAVIYVDEELPLCISGDGGGGIFLWSISVPMGKEPLKTWYEQKDWRYSGIHALTTAGNGYLYTGSGDRSVKAWSLQDGTLSCIMDGHKSVVSTLAACDGILYSGSWDGTIRLWSLTDHSPLTVLGNDLPGTATSVLSVTANQNILVAAHENGQIKAWRDDVFKKSTQCHSGAILACVMEGKWLFTGGWDKIVNVQELSGDEFQVDTRPIGSIPGGSVVTALLCWQGKLFVGHGDRTIKVYYHGK